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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAACACCCATTCAACATTTTCTCTGTCTATCTCTCGTTGTAGCGTAGCGCAGCAGgtatgttcccaaccatttcctgcgttctgttctgctctgttcggttatgatagatccgttagtgttttctcttccgttttgcttttcttatgaatgaatgaatgcatgcttatattttgagtgaatttgacag

Basic information

species Glycine max
transcript GLYMA12G36940.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|208160552|gb|GD960458.1|GD960458
EST:     CCCATTCAACATTTTCTCTGTCTATCTCTCGTTGTAGCGTAGCGCAGCAG                         TTGAATTTGGAAAACAAGATGTCTCACCGCAAGTTCGAGCACCCGAGACAC
genomic: CCCATTCAACATTTTCTCTGTCTATCTCTCGTTGTAGCGTAGCGCAGCAGgtatgttccc ... aatttgacagTTGAATTTGGAAAACAAGATGTCTCACCGCAAGTTCGAGCACCCGAGACAC
EST: gi|151408452|gb|EV278260.1|EV278260
EST:     TCGTTGTAGCGTAGCGCAGCAG                         TTGAATTTGGAAAACAAGATGTCTCACCGCAAGTTCGAGCACCCGAGACAC
genomic: TCGTTGTAGCGTAGCGCAGCAGgtatgttccc ... aatttgacagTTGAATTTGGAAAACAAGATGTCTCACCGCAAGTTCGAGCACCCGAGACAC