1 5' 3' | 2 5' 3' | 3 5' 3' |
CTGCGCGTGCGTCTGCAAGAGGTGGCGTGACATCACGCGCGAGGTCGTGCGTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtttcccccttcaaaataaattggttcttttttatgtttgagtttctgggaacgaatcattttcttattctctttttaattttttaaattcat...
species | Glycine max |
transcript | GLYMA12G35920.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAG CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAGEST: gi|15285195|gb|BI469086.1|BI469086
genomic: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtt ... tgacctgcagCCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAG
EST: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAG CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAGEST: gi|26057434|gb|CA800348.1|CA800348
genomic: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtt ... tgacctgcagCCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAG
EST: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAG CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAGEST: gi|10237471|gb|BE806359.1|BE806359
genomic: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtt ... tgacctgcagCCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAG
EST: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTANACAG CCAGGAACCACGTGACGTTCCCCACCAATTGTCTTATAAAGCGGAACCAGAEST: gi|27445829|gb|CA952952.1|CA952952
genomic: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtt ... tgacctgcagCCAGGA-CCACGTGACGTTCCCCACCAAT-GTCTTATAAAGCGGAACCAGA
EST: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAG CCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAG
genomic: GTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtt ... tgacctgcagCCAGGACCACGTGACGTTCCCCACCAATGTCTTATAAAGCGGAACCAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCGCGTGCGTCTGCAAGAGGTGGCGTGACATCACGCGCGAGGTCGTGCGTGTGCCCTCGCATACCGGGAAAATCACTTTCCCTTCGTGCCTTAAACAGgtttgaggtttcccccttcaaaataaattggttcttttttatgtttgagtttctgggaacgaatcattttcttattctctttttaattttttaaattcat
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