1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
ACCCTTGGATGGGTGACAGGGACAGGTGGCAGCATCTCCATGAAGGTCCACGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcgtttctacccttttggttgctgtgtcccaagtttggattttttggtgtttacttgtcatttcaggcttgtttggtttctgggtctgtgcta...
species | Glycine max |
transcript | GLYMA12G35390.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACAEST: gi|209709958|gb|BW657304.1|BW657304
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACAEST: gi|6341560|gb|AW164384.1|AW164384
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACAEST: gi|16995954|gb|BM085326.1|BM085326
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACAEST: gi|254313702|gb|GR831331.1|GR831331
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACAEST: gi|5666631|gb|AI930667.1|AI930667
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
EST: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTG GTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
genomic: CGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcg ... atgtgtgcagGTGTTCAGAAAGAAAGAATGGAGCCAGAGGACATGTATGTATTATCACACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCTTGGATGGGTGACAGGGACAGGTGGCAGCATCTCCATGAAGGTCCACGATGACTCAATTCCCAAGCCTCAGCAGCTCATACTCATGGCCCCTTCTGgtatctttcgtttctacccttttggttgctgtgtcccaagtttggattttttggtgtttacttgtcatttcaggcttgtttggtttctgggtctgtgcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA