1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GGTGTCTGATGATGACAAACTCGTTGAGTATGATGCCTTGTTGTTGGATCGTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaaaaatctcttcctacttctgtcttctgcttgtgaaaaatatgagttttttagccaacatcaatggatttatggaaccccacttcaattttt...
species | Glycine max |
transcript | GLYMA12G33820.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACG GTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCTEST: gi|213602646|gb|DB968900.1|DB968900
genomic: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaa ... tgcttgatagGTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCT
EST: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACG GTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCTEST: gi|213604791|gb|DB956118.1|DB956118
genomic: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaa ... tgcttgatagGTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCT
EST: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACG GTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCTEST: gi|209709521|gb|BW668412.1|BW668412
genomic: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaa ... tgcttgatagGTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCT
EST: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACG GTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAEST: gi|213590587|gb|DB973332.1|DB973332
genomic: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaa ... tgcttgatagGTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAA
EST: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACG GTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCT
genomic: GTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaa ... tgcttgatagGTCCAAGATTGTTACGAGCTGTCAGCTGAGTACGAAGGAGAGCATAAGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTGTCTGATGATGACAAACTCGTTGAGTATGATGCCTTGTTGTTGGATCGTTTCCTTGACATTCTTCAGGATTTGCATGGTGAAGATATCAGACAAACGgtactgtcaaaaatctcttcctacttctgtcttctgcttgtgaaaaatatgagttttttagccaacatcaatggatttatggaaccccacttcaattttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcttcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -accccac