1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TCCAATTCTTACTTTCTTCTTCTCTGCGATTTTGTTCGCAGGTGTTAGATCTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattctctcgtcttctacttgtctttgttcaaatttcatagtttgttcgcacgttttattgtgaaagcaatgttgttgatcgtttttcgttgata...
species | Glycine max |
transcript | GLYMA12G31040.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|208099220|gb|GD898749.1|GD898749
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|298169144|gb|HO020504.1|HO020504
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCCGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|151413165|gb|EV282973.1|EV282973
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|192315372|gb|FK009636.1|FK009636
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|7232575|gb|AW567930.1|AW567930
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGAEST: gi|19934524|gb|BQ079554.1|BQ079554
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
EST: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAG TAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
genomic: CTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattc ... gttgttgcagTAAGCTTCAGAGTGATGCTCTTAGAGAAGCTATCTCAGGAATCATGACTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCAATTCTTACTTTCTTCTTCTCTGCGATTTTGTTCGCAGGTGTTAGATCTGTACCTGCCTAGCCATTGATTTGGAAAAGTCCAAGCTTCAAAGATGAGgtattcattctctcgtcttctacttgtctttgttcaaatttcatagtttgttcgcacgttttattgtgaaagcaatgttgttgatcgtttttcgttgata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG