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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACCACAAGCAAGATGCATGTTGTTGTGGTGCTCAACACGCAATCCTACTGCAGAGGCCTAGAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAGgtaggtttcttttcttttattctcttttgggaaaataataataatcgattataatttcctttgcttcgaatcgcag

Basic information

species Glycine max
transcript GLYMA12G28900.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254317829|gb|GR826813.1|GR826813
EST:     GCAGAGGCCTAGAA-CTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAG                         GGAACAAGGACTTTGAGTTTCAGGAGGCTGCTGCTGCGTCCTTCTCTTGGG
genomic: GCAGAGGCCTAGAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAGgtaggtttct ... cgaatcgcagGGAACAAGGACTTTGAGTTTCAGGAGGCTGCTGCTGCGTCCTTCTCTTGGG
EST: gi|11413290|gb|BF425301.1|BF425301
EST:     GCAGAGGCCTANAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAG                         GGAACAAGGACTTTGAGTTTCAAGAGGCTGCTGCTGCNTCCTTCTCTTGGG
genomic: GCAGAGGCCTAGAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAGgtaggtttct ... cgaatcgcagGGAACAAGGACTTTGAGTTTCAGGAGGCTGCTGCTGCGTCCTTCTCTTGGG
EST: gi|254317828|gb|GR826812.1|GR826812
EST:     GCAGAGGCCTAGAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAG                         GGAACAAGGACTTTGAGTTTCAGGAGGCTGCTGCTGCGTCCTTCTCTTGGG
genomic: GCAGAGGCCTAGAACCTCCTTCATCTTCTCCTTCCGTCGTTTCCAACAAGgtaggtttct ... cgaatcgcagGGAACAAGGACTTTGAGTTTCAGGAGGCTGCTGCTGCGTCCTTCTCTTGGG