1 5' 3' | 2 5' 3' |
TTGGTTCAGTACCTTTGCCGCAAGGTTGCTGGCCATCATTTCTCTCTTCCAATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGgtaatttatttcatcatttatcataaaaaaaaatctaaaaacgatctttaaccacgatttttgtcacaatatcaaagtttttagagttcgcaatcacaat...
species | Glycine max |
transcript | GLYMA12G22880.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAG GTAAGGCAGCGTTTGGAGAGAAGGAGTGGTACTTCTTCAGTCCAAGAGACAEST: gi|14999391|gb|BI320350.1|BI320350
genomic: AATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGgtaatttatt ... ggtggtgtagGTAAGGCAGCGTTTGGAGAGAAGGAGTGGTACTTCTTCAGTCCAAGAGACA
EST: AATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAG GTAAGGCAGCGTTTGGAGAGAAGGAGTGGTACTTCTTCAGTCCAAGAGACA
genomic: AATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGgtaatttatt ... ggtggtgtagGTAAGGCAGCGTTTGGAGAGAAGGAGTGGTACTTCTTCAGTCCAAGAGACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGTTCAGTACCTTTGCCGCAAGGTTGCTGGCCATCATTTCTCTCTTCCAATCATTGCTGAAGTTGATTTGTACAAGTTTGATCCATGGGTTCTTCCAGgtaatttatttcatcatttatcataaaaaaaaatctaaaaacgatctttaaccacgatttttgtcacaatatcaaagtttttagagttcgcaatcacaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaaa