Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAAAATAAAAAAGAAAACCAAAAAATAATGTCAATGGAAATGATGGCAACGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacactctttctctccctctccctctctctttcttctttcatttattttttccttatttttctaagctttatgttcccatcagctaatttggcaag...

Basic information

species Glycine max
transcript GLYMA12G10210.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27425967|gb|CA937487.1|CA937487
EST:     ACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: ACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
EST: gi|298193194|gb|HO033628.1|HO033628
EST:     CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
EST: gi|192299092|gb|FG990406.1|FG990406
EST:     CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
EST: gi|298182663|gb|HO031398.1|HO031398
EST:     CGGAACGTGTTTGTTACGTTCACTGCAACTTCTGCAACACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
EST: gi|7691759|gb|AW759880.1|AW759880
EST:     GTTCACTGCAACTTCTGCAACACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: GTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
EST: gi|298183030|gb|HO028293.1|HO028293
EST:     CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCG                         GTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA
genomic: CGGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTAGCGgtacaacact ... gtattggcagGTTAGTGTTCCATACAGCAGTTTGCTAACCATAGTGACGGTTAGATGTGGA