1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TTCGCCGAAGTTGACATGGGTTCCGACTTCAACGCCCCAACGGTTCGAGCTACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccctctccctcaaaaaatttccacctttctcttttttatctgttacccttttccatttggtgccaaatttctagtctttttgtgttttcgtgt...
species | Glycine max |
transcript | GLYMA12G09750.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTGGCTATGGGTCCCAGCTTGEST: gi|21993759|gb|BQ785287.1|BQ785287
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGTTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|16348435|gb|BI974030.1|BI974030
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|192318583|gb|FK008285.1|FK008285
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAATCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|9986801|gb|BE660909.1|BE660909
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|192294787|gb|FG987476.1|FG987476
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|21889516|gb|BQ742729.1|BQ742729
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTGEST: gi|192318582|gb|FK008284.1|FK008284
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
EST: TACCGTTGTTCAATCCTCCACCATCTTCTACGACACACCAGCCACCTTAG ATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
genomic: TACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccc ... gtgtgtgtagATAAGGCTGAGAGGTTGTTGGCTGAAGCTACTAGCTATGGGTCCCAGCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCGCCGAAGTTGACATGGGTTCCGACTTCAACGCCCCAACGGTTCGAGCTACCGTTGTTCAAGCCTCCACCATCTTCTACGACACACCAGCCACCTTAGgtcctttccctctccctcaaaaaatttccacctttctcttttttatctgttacccttttccatttggtgccaaatttctagtctttttgtgttttcgtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccctc
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