1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAGTTACCAAAAATCTCTGCATTATCTCGTTTCCCAAATGCTTTTTCCAAAACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccactcactctgtttcttgggtcccaactgaacttgtttcattagttttttttaatccctttagtgagaaagttagcatttttggagaggggaag...
species | Glycine max |
transcript | GLYMA12G09720.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAG TGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAATEST: gi|192296222|gb|FG989763.1|FG989763
genomic: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccact ... cattttttagTGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAAT
EST: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAG TGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAATEST: gi|8826606|gb|BE210336.1|BE210336
genomic: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccact ... cattttttagTGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAAT
EST: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAG TGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAATEST: gi|5760499|gb|AI965862.1|AI965862
genomic: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccact ... cattttttagTGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAAT
EST: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAG TGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAAT
genomic: AACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccact ... cattttttagTGAGTAATGCAGACGAGGATGTCTTGCAAATATTTTTTAAGGAGAGAGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGTTACCAAAAATCTCTGCATTATCTCGTTTCCCAAATGCTTTTTCCAAAACCACTCACCAGGTTTCAGTGCTAAGAGTAAGAGCTTCTCGTCCTTCAGgtttgccactcactctgtttcttgggtcccaactgaacttgtttcattagttttttttaatccctttagtgagaaagttagcatttttggagaggggaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT