1 5' 3' | 2 5' 3' | 3 5' 3' |
AAGCCCCGCTGCTGAAGGAGTCTTCACTGACTTAGTCAACAAAAGGGACCTCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttatctatgaacaaacaagcaaacacccttatgtcatttcatccaaaagatcacttctttaaaagaaaaattaagatggtttttttttagttta...
species | Glycine max |
transcript | GLYMA12G09200.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|26269511|gb|CA820574.1|CA820574
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|192332259|gb|FK023908.1|FK023908
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|298167178|gb|HO010617.1|HO010617
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACTATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAACAGGCGTGGGATTEST: gi|213603562|gb|DB962708.1|DB962708
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|13252385|gb|BG363288.1|BG363288
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|298194521|gb|HO042993.1|HO042993
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGGG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|192316064|gb|FK008889.1|FK008889
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|208254013|gb|GE055991.1|GE055991
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCACCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAEST: gi|27425137|gb|CA936657.1|CA936657
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAA
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|298165521|gb|HO011570.1|HO011570
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAGTGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|17401417|gb|BM178199.1|BM178199
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATTEST: gi|9902999|gb|BE611967.1|BE611967
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
EST: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAG GGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
genomic: TCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttat ... attttcgaagGGAAATGAAGCGGATTCGAGAATGAGGGCAGCTTCAAAAAGGCGTGGGATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAGCCCCGCTGCTGAAGGAGTCTTCACTGACTTAGTCAACAAAAGGGACCTCAATTCGAAGTTCAAAATCGACTCTGCTGGCACCATCAATTACCACGAGgtgggtttatctatgaacaaacaagcaaacacccttatgtcatttcatccaaaagatcacttctttaaaagaaaaattaagatggtttttttttagttta
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