1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCGTGTTTTTTCCCCCTCTCTTTTTTAAGAAGAACGCGCTTTCTCGTATCTCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaatttattttggtcatcgttgcaattttgtttttcccgcagaatccgagatcgtgcagagatgttttgaaaaaacggtttccttcttctttac...
species | Glycine max |
transcript | GLYMA12G05470.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAG GAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGEST: gi|254348345|gb|GR852024.1|GR852024
genomic: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaat ... ctatctttagGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGG
EST: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAG GAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGEST: gi|151393711|gb|EV263586.1|EV263586
genomic: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaat ... ctatctttagGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGG
EST: TCCTCGTTTGAAGAAGCGAAGCGGCATCGCATTCGATGAGTGATGCGAAG GAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGGEST: gi|17401071|gb|BM177853.1|BM177853
genomic: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaat ... ctatctttagGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGG
EST: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAG GAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGG
genomic: TCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaat ... ctatctttagGAAAGAAGTGGGTTTTGCGTGTGGCCAGATGCGAGACAACTTTGCTTAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGTGTTTTTTCCCCCTCTCTTTTTTAAGAAGAACGCGCTTTCTCGTATCTCCTCGTTTGAAGAAGCGAAACGGCATCGCATTCGATGAGTGATGCGAAGgtagtttaatttattttggtcatcgttgcaattttgtttttcccgcagaatccgagatcgtgcagagatgttttgaaaaaacggtttccttcttctttac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttcttc