Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAACGAACACTGTAAGCATGAACAAGCGCCAAGAAGATGTGCGCAACATAGCTACTACCCTCGACTCCAGATTCAATCAGACCCTCAGAAATGTTCAAGGgtaacccccaattcttctcttttttctcttttcagatcgagggttattattgcttcgtcgaggtcaattttttccattttctattttctaactgatttaa...

Basic information

species Glycine max
transcript GLYMA12G05350.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207813870|gb|GD785105.1|GD785105
EST:     GCTACTACCCTCGACTCCAGATTCAATCAGACCCTCAGAAATGTTCAAGG                         GTTACTCAAAGGTCGTAGTATACCTGGTAAAATATTATTGAGCCGTAGGGT
genomic: GCTACTACCCTCGACTCCAGATTCAATCAGACCCTCAGAAATGTTCAAGGgtaaccccca ... ctctatcaagGTTACTCAAAGGTCGTAGTATACCTGGTAAAATATTATTGAGCCGTAGGGT
EST: gi|193593499|gb|FK547977.1|FK547977
EST:     GCTACTACCCTCGACTCCAGATTCAATCAGACCCTCAGAAATGTTCAAGG                         GTTACTCAAAGGTCGTAGTATACCT
genomic: GCTACTACCCTCGACTCCAGATTCAATCAGACCCTCAGAAATGTTCAAGGgtaaccccca ... ctctatcaagGTTACTCAAAGGTCGTAGTATACCT