1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TATTATATTACGAAATTCAATTGCAGCTGCTGCTGAATCGTAATCGATCTTATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatagcattagcaagcatgaaatgccattttgtttttatcttcatatttattttgttaatgatgatgcatgtaattggataccatgagtgtatatag
species | Glycine max |
transcript | GLYMA12G01150.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|208301831|gb|GE099397.1|GE099397
genomic: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|192297440|gb|FG989504.1|FG989504
genomic: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|298174356|gb|HO017692.1|HO017692
genomic: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCTEST: gi|151404917|gb|EV274731.1|EV274731
genomic: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
EST: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAG GTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
genomic: TATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatag ... gtgtatatagGTCAGTGCACCTGTTGATGTTGAAACAAACAAGCTTGCTTCAGATATAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTATATTACGAAATTCAATTGCAGCTGCTGCTGAATCGTAATCGATCTTATATCTACACTCTACCATGGACATTGATGATGATTTCACATTTTGTCAGgtaaacatagcattagcaagcatgaaatgccattttgtttttatcttcatatttattttgttaatgatgatgcatgtaattggataccatgagtgtatatag
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