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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCGAACCGTTTCCGCCTTCAAAGAAAAAGGAGTTCTCAGTGTCTCTGAGTTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaatttcccccttttttctaattttcaattcccgcccccctccctttttttctctcctgattatgggtattggatatttaaattcaacttgcc...

Basic information

species Glycine max
transcript GLYMA12G00830.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298192494|gb|HO036576.1|HO036576
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|192306687|gb|FG998085.1|FG998085
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|213591644|gb|DB969744.1|DB969744
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCGCCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|7684723|gb|AW755371.1|AW755371
EST:     TCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTTGTTCTTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAAC
genomic: TCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCT-Ggtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAAC
EST: gi|192330860|gb|FK021619.1|FK021619
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|16104976|gb|BI892716.1|BI892716
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|151395552|gb|EV265429.1|EV265429
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCTAGAGGAAGCCATACTCGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|298169552|gb|HO020912.1|HO020912
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|298186631|gb|HO037264.1|HO037264
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|192324977|gb|FK016133.1|FK016133
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
EST: gi|151404711|gb|EV274525.1|EV274525
EST:     TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTG                         GGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA
genomic: TTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGgtaattccaa ... tttccaatagGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCACCTGAGAAACA