1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGGGTTTAGGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGCTCCACATTGGAGAAGTTTTATCTACTGTTCCTACAATAGgtgcgttttatactataaactcttaatttaatctaattattctataagcagatttcttggtataagctaattaagccatttctgtgttggtagccaaagg...
species | Glycine max |
transcript | GLYMA11G09790.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTGTACAAGCTCCACA-TGGAGAAAGTTTTATCTACTGTTCCTACAATAG GTTTTAATGTGGAGAAGGTTCAGTATAAGAATGTTGTTTTCACGGTTTGGGEST: gi|192334432|gb|FK024447.1|FK024447
genomic: CTGTACAAGCTCCACATTGGAG-AAGTTTTATCTACTGTTCCTACAATAGgtgcgtttta ... tgctttgcagGTTTTAATGTGGAGAAGGTTCAGTATAAGAATGTTGTTTTCACGGTTTGGG
EST: ACTGTACAAGCTCCACATTGGAGAAGTTTTATCTACTGTTCCTACAATAG GTTTTAATGTGGAGAAGGTTCAGTATAAGAATGTTGTTTTCACGGTTTGGG
genomic: ACTGTACAAGCTCCACATTGGAGAAGTTTTATCTACTGTTCCTACAATAGgtgcgtttta ... tgctttgcagGTTTTAATGTGGAGAAGGTTCAGTATAAGAATGTTGTTTTCACGGTTTGGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGTTTAGGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGCTCCACATTGGAGAAGTTTTATCTACTGTTCCTACAATAGgtgcgttttatactataaactcttaatttaatctaattattctataagcagatttcttggtataagctaattaagccatttctgtgttggtagccaaagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT