1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
ATAATCAGTTCTCGATTTGATTTGATCGGAACAGAACAGAGGCATGGGTCAAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttccttccttctccattccttttttttattattattctttttcttttaatatcaacggtcataataatgataatataataattctaagaagaaga...
species | Glycine max |
transcript | GLYMA11G09790.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGG GTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGEST: gi|9820855|gb|BE556365.1|BE556365
genomic: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttcct ... ttgggtttagGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
EST: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGG GTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGEST: gi|151397286|gb|EV267159.1|EV267159
genomic: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttcct ... ttgggtttagGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
EST: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGG GTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGEST: gi|192303486|gb|FG995920.1|FG995920
genomic: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttcct ... ttgggtttagGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
EST: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGG GTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAGEST: gi|151405888|gb|EV275703.1|EV275703
genomic: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttcct ... ttgggtttagGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
EST: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGG GTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
genomic: AAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttcct ... ttgggtttagGTTGTGATGCTTGGTCTAGATGCTGCTGGCAAAACAACTATACTGTACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAATCAGTTCTCGATTTGATTTGATCGGAACAGAACAGAGGCATGGGTCAAGCTTTTCGGAAGCTCTTCGACACCTTCTTCGGCAATACCGAGATGCGGgtctcttccttccttctccattccttttttttattattattctttttcttttaatatcaacggtcataataatgataatataataattctaagaagaaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttctc