1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TTTATCTTCCAATTGTCTGATACTCAGAGACACCGGCACCGGCATGGGTCAAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttctgcttgattgttaaatgttaatttttacactcaattattattaattttattatttccttgatctgtttgttcag
species | Glycine max |
transcript | GLYMA11G01380.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAGEST: gi|298188565|gb|HO035258.1|HO035258
genomic: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
EST: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAGEST: gi|58018098|gb|CX704840.1|CX704840
genomic: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
EST: TTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAGEST: gi|192294469|gb|FG987398.1|FG987398
genomic: TTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
EST: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAGEST: gi|298185092|gb|HO030305.1|HO030305
genomic: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
EST: AAGCTTTTCGGAAGCTATTTGACTCCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAGEST: gi|298170232|gb|HO018856.1|HO018856
genomic: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
EST: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGG GTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
genomic: AAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttct ... gtttgttcagGTTGTGATGCTTGGTCTTGATGCTGCTGGCAAAACAACTATACTTTACAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTATCTTCCAATTGTCTGATACTCAGAGACACCGGCACCGGCATGGGTCAAGCTTTTCGGAAGCTATTTGACACCTTCTTTGGCAACACCGAGATGAGGgtaactttctgcttgattgttaaatgttaatttttacactcaattattattaattttattatttccttgatctgtttgttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG