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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAAACGATTGTTAAGAAAATGTGAGAATAAGCTATTCCCTAACACAATCATCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAGgtatgtttctattttatatctatacctgttgaatatccaggtatttgagttgagcattctggcaatgacattttgtcatgacttctgatttttattggta...

Basic information

species Glycine max
transcript GLYMA10G43750.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207844155|gb|GD817406.1|GD817406
EST:     TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAG                         TCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACCAACTTTACATATTT
genomic: TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAGgtatgtttct ... ttctctccagTCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACCAACTTTACATATTT
EST: gi|208023555|gb|GD821226.1|GD821226
EST:     TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAG                         TCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACCAACTTTACATATTT
genomic: TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAGgtatgtttct ... ttctctccagTCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACCAACTTTACATATTT
EST: gi|208115930|gb|GD909033.1|GD909033
EST:     TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAG                         TCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACC
genomic: TCTCCATTCATGCGTATCGTGATCGGATTTATGTTGGTGATGTCCAAGAGgtatgtttct ... ttctctccagTCTTTCCATTATTGCAAGTATAGGCGTGATGAAAACC