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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TACTTTCCTAATCAGTTAGCTTAGAAAAGATGCAAAGCTTCAACACAACCGAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGgtaaatatgatttttattttccctctttttgtgaaatgagtaacgatagctggaacaaggattcacatgcagcaacaaatgcatgtgtttatacttttcatgattagatataaaaaatgtatctttttaaaacagagtttccttgttttttctctggtctgaaacag

Basic information

species Glycine max
transcript GLYMA10G42280.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|298193735|gb|HO040383.1|HO040383
EST:     GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCG                         GGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC
genomic: GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGgtaaatatga ... tctgaaacagGGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC
EST: gi|24136574|gb|BU927084.1|BU927084
EST:     GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCG                         GGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC
genomic: GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGgtaaatatga ... tctgaaacagGGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC
EST: gi|298165985|gb|HO008956.1|HO008956
EST:     GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCG                         GGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC
genomic: GAATCAGAATCGACCTCACCTCTATATTCCCATTCTCCCTTCTATCACCGgtaaatatga ... tctgaaacagGGGAAATGACCCCAGCCGAAATCCAACGCGTTTCTCGGATCTTCAGCATTC