Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CGACAACTTCGACGACTTATCTGTCAAAGAAGTCGGAGATGGCAACCTTAACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacacaaacactttttgttttatgtttcacaaaatcatgggcaatcgccaatttcgtgtctttcttcttatatag

Basic information

species Glycine max
transcript GLYMA10G40730.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16347795|gb|BI973390.1|BI973390
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|192297825|gb|FG988323.1|FG988323
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|298187248|gb|HO034397.1|HO034397
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|192295492|gb|FG987106.1|FG987106
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|209714541|gb|BW684890.1|BW684890
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|207734310|gb|GD711602.1|GD711602
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAGACAG                         GCTCTGCCATACG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACG
EST: gi|13312051|gb|BG405694.1|BG405694
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|16347840|gb|BI973435.1|BI973435
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|213587037|gb|DB965867.1|DB965867
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|14259084|gb|BG881992.1|BG881992
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
EST: gi|7926168|gb|AW832194.1|AW832194
EST:     ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAG                         GCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG
genomic: ACTTCGTCTTCATTGTTTCCAACCCCGCAGGTTCTTTTGTCATCAAACAGgtaacacaca ... tcttatatagGCTCTGCCATACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAG