Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|8669755|gb|BE190862.1|BE190862EST: ACAGATGCCGAAGCTCGCGCTTTCGGTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAAGT-GATCAGCAAATGGCAGCAGCTTGAT
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGA-GTTGATCAGCAAAGGGCAGCAGCTTGAT
EST:
gi|15204068|gb|BI426836.1|BI426836EST: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGNTCACT
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
EST:
gi|15201230|gb|BI424763.1|BI424763EST: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
EST:
gi|193343737|gb|FK311497.1|FK311497EST: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAGTTGATCAG
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGAGTTGATCAG
EST:
gi|208191461|gb|GD987881.1|GD987881EST: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
EST:
gi|151400897|gb|EV270711.1|EV270711EST: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTG ATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
genomic: ACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaa ... ttgtttatagATATGATTGAAGAGTTGATCAGCAAAGGGCAGCAGCTTGATGCGGTTCACT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAGGACTCCGATTTGTACCGGAAGCTTGTTATTGCTTCCGCTTGGAGGAAACAGATGCCGAAGCTCGCGCTTTCGCTTGGTCTCGCTCAGCAAATGCCTGgtatagtcaatagtgataattaattaatttcaattctctgaatattgattctgtgcttcagctgaaaatgttgtgtttgtgtgaattgtttatag
- - - - - - - - - - - - - - - - - - - - - - - - - CAGATG