1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CCATTCAGCAGAAAAGGGTCTTCTGGGTTTTCATCATCATCCACTGCAGAGCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataatattctcagatgggtatctttcccttataaaaaaaacatttttttacaactttttcatctgatcttcctgatgctgttttgtcctaataatt...
species | Glycine max |
transcript | GLYMA10G37760.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|193621657|gb|FK567227.1|FK567227
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|192304810|gb|FG996026.1|FG996026
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|209724402|gb|BW658171.1|BW658171
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|22931647|gb|BU548786.1|BU548786
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|298178018|gb|HO023867.1|HO023867
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCGEST: gi|14990773|gb|BI316446.1|BI316446
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
EST: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAG GGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
genomic: GCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataata ... atggtaacagGGGCATCCAGTGGTATTGGAACTGAGACTTCACGTGTTCTTGCTTTGCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCATTCAGCAGAAAAGGGTCTTCTGGGTTTTCATCATCATCCACTGCAGAGCAAGTCACTGAAGGAATTGATGGAACTGGTCTCACTGCCATTGTCACAGgttaataatattctcagatgggtatctttcccttataaaaaaaacatttttttacaactttttcatctgatcttcctgatgctgttttgtcctaataatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaaa