1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAACCAACAATCCAACCACCCTGAGTCTCGTGGCGATTTCTCAATCTTGCTCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatcttctctcttccctcacatgcatgcatgcacgcaccaaaaccccttttcaattataaaacagcatcatttctatctatcatatgccctcact...
species | Glycine max |
transcript | GLYMA10G36990.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCAGTCACATTGTTCTCGGTTGCGAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGEST: gi|151406217|gb|EV276032.1|EV276032
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
EST: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGEST: gi|17964404|gb|BM271140.1|BM271140
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
EST: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGEST: gi|120532042|gb|EH260175.1|EH260175
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
EST: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGEST: gi|213608834|gb|DB957198.1|DB957198
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
EST: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAGEST: gi|17518569|gb|BM187611.1|BM187611
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
EST: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAG GCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
genomic: TCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatct ... gcatgcacagGCGGGTCTTGCTAAGCTTATTGGACTTGCAGGAGAGACAAATGTTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCAACAATCCAACCACCCTGAGTCTCGTGGCGATTTCTCAATCTTGCTCAGTCACATTGTTCTCGGTTGCAAGTTCCTCTGCTCTGCTGTTAACAAGgtatccatcttctctcttccctcacatgcatgcatgcacgcaccaaaaccccttttcaattataaaacagcatcatttctatctatcatatgccctcact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT