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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CACTGTGTGGATGGCCTCTGACCCATCAACCAGACCCGACTTGACCCGACTCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaatcaatccctactcccactcacctttgcaattcccttcaattatgttgtttttgtggcttcgaaatttgttgatccattcaattttatgtaactattattggtgcgaag

Basic information

species Glycine max
transcript GLYMA10G35690.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151393287|gb|EV263162.1|EV263162
EST:     TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAG                         AGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
genomic: TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaa ... tggtgcgaagAGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
EST: gi|23734175|gb|BU765314.1|BU765314
EST:     TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAG                         AGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
genomic: TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaa ... tggtgcgaagAGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
EST: gi|22525449|gb|BU084260.1|BU084260
EST:     TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAG                         AGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
genomic: TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaa ... tggtgcgaagAGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
EST: gi|23734386|gb|BU765421.1|BU765421
EST:     TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAG                         AGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
genomic: TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaa ... tggtgcgaagAGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
EST: gi|22525312|gb|BU084123.1|BU084123
EST:     TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAG                         AGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG
genomic: TCTTTTCGGGCACCCGCTTCATCTTCTCCAGCCCTAAGCCCAGGGAAAAGgtaagtacaa ... tggtgcgaagAGTGAAGAATTGAAGGCGAGGCTGAAAAAGTTGGAAGATATAGCGGAGAGG