1 5' 3' | 2 5' 3' | 3 5' 3' |
CATTTTCAATCTCTTTCACCTAAGACACGTTCCTCTTTCCATTCCTTTCTTCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcccataattaatgctttaattttttccattttttatctttaaactttccccattatttttgcgttgctcgtgctcggctctttcattatctg...
species | Glycine max |
transcript | GLYMA10G35680.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCTTCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGACEST: gi|21678119|gb|BQ630461.1|BQ630461
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
EST: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGACEST: gi|192306573|gb|FG997243.1|FG997243
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
EST: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGACEST: gi|192326462|gb|FK017719.1|FK017719
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
EST: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGACEST: gi|21678189|gb|BQ630540.1|BQ630540
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
EST: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGACEST: gi|7686557|gb|AW757205.1|AW757205
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
EST: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAG GTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
genomic: TCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcc ... ccttatgcagGTCTTTTGAAGCAGAAGAATGGACTTCTTTACTAGAGACATAAATGAGGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATTTTCAATCTCTTTCACCTAAGACACGTTCCTCTTTCCATTCCTTTCTTCCTCCGTCCCATTCTCGAATTGGCGTGTGCCTCTTGCTATCCCTCAAAGgtattattcccataattaatgctttaattttttccattttttatctttaaactttccccattatttttgcgttgctcgtgctcggctctttcattatctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tttcccc