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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCCTCAACCTCTGCTGACCCTTTTCCTCTTTTTCTCCCTTCTCTCAATTGCCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGGgtaagttttctctttcccatctgctttcgctcaagatctgtcactaaatggaagcaattgttttgggggtgctgatcactgcctacaaaatttgaacatg...

Basic information

species Glycine max
transcript GLYMA10G35450.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7692019|gb|AW760135.1|AW760135
EST:     CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGG                         ATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
genomic: CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGGgtaagttttc ... atccttgcagATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
EST: gi|14259278|gb|BG882186.1|BG882186
EST:     CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGG                         ATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
genomic: CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGGgtaagttttc ... atccttgcagATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
EST: gi|6566834|gb|AW234466.1|AW234466
EST:     CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGG                         ATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
genomic: CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGGgtaagttttc ... atccttgcagATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG
EST: gi|298163231|gb|HO011964.1|HO011964
EST:     CCAACTCTTCTCCTTCCCAACACCTTCGGATCGCCAATGCCGAACGCATG                         ATTGATTTGACTTCTCACATTATTATGGTGTACTTGACATTGAAT
genomic: CCAACTCTTCTCCTTCCCAACACCTTCAGATCGCCAATGCCGAACGCAGGgtaagttttc ... atccttgcagATTGATTTGACTTCTCACATTATTAAGGTGTACTTGACATTGAAG