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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAAGAAAAAAAAACCTAATTCGTGAGAAGCCACCGCACAAACACACAAACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAGgtttgatcatttccgtcccctttttgttatccacaaatgtgtttctgtttcttatgatgatgagatttgtagtatcataccatttgcgaaacag

Basic information

species Glycine max
transcript GLYMA10G33100.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9203615|gb|BE329839.1|BE329839
EST:     ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAG                         TAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC
genomic: ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAGgtttgatcat ... tgcgaaacagTAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC
EST: gi|17022576|gb|BM093610.1|BM093610
EST:     ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAG                         TAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC
genomic: ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAGgtttgatcat ... tgcgaaacagTAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC
EST: gi|298175481|gb|HO015114.1|HO015114
EST:     ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAG                         TAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC
genomic: ACCCTTTCTTCCGGTCGCACATCTCTGTTCACTGCTCGTCCCTTTTCCAGgtttgatcat ... tgcgaaacagTAAAAGTGTACTCTGCTTGTTGCTGTGATGGTGGTCGAAGAAGAAAATGGC