1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTCATAATTCGTTCTTTTCTACTACCTTGAAATGTTTATGATAGGCATTAATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACATTGATGgtaaagtctttggtgaatgagtctacctttctgctatgctgctagtgattcaagtctacacttcatttgattttgccacctaaccttcctttgtattatagtaccctttccaaattccaatgcttttgtttcgtccttctatatttcctatgtttgtgtcactctcaatctcactccatcttatacaggatag
species | Glycine max |
transcript | GLYMA10G32690.3 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACATTGATGGATAGEST: gi|192317018|gb|FK010921.1|FK010921
genomic: ATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACA-T--T-GAT-Ggtaaagtctt ... tacagg
EST: ATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACATTGATG ATTAACTATCACAAACTAAACTACACACACAAGATCCGGGGTTTGATCAAC
genomic: ATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACATTGATGgtaaagtctt ... tacaggatagATTAACTATCACAAACTAAACTACACACACAAGATCCGGGGTTTGATCAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCATAATTCGTTCTTTTCTACTACCTTGAAATGTTTATGATAGGCATTAATTAATTAATAAGAAAGAATTTCTGGGAAGGGATCACAATCACATTGATGgtaaagtctttggtgaatgagtctacctttctgctatgctgctagtgattcaagtctacacttcatttgattttgccacctaaccttcctttgtattatagtaccctttccaaattccaatgcttttgtttcgtccttctatatttcctatgtttgtgtcactctcaatctcactccatcttatacaggatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA