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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGAAGTTATTTTTGACGCGTGAAATAGGCGCCGGCGTTCATCGTTGAAAAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaagttttttcactgatccatacatagccttagttgtgatgtgaatctaattttgtcatgttttatag

Basic information

species Glycine max
transcript GLYMA10G30360.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209724026|gb|BW671620.1|BW671620
EST:     GAAAGTGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: GAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
EST: gi|15664769|gb|BI702140.1|BI702140
EST:     AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
EST: gi|151402721|gb|EV272534.1|EV272534
EST:     AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
EST: gi|192300845|gb|FG991167.1|FG991167
EST:     AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
EST: gi|42722877|gb|CK768776.1|CK768776
EST:     AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
EST: gi|298174714|gb|HO014745.1|HO014745
EST:     AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAG                         GTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC
genomic: AAGCGAAAATGGATATACCTCGTCTGAAACTTGGAACCCAAGGCCTGGAGgtaacattaa ... tgttttatagGTTTCCAAGTTGGGATTTGGTTGTGCGGGGCTTAGTGGAGTGTTTGACGGC