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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTCGCAGCAGCATTTGAACTCTACTTCTCTCGTTCTCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattctgcaaaacccattcctgcaatcaatccacgaaattatagcttggaaattagacttcaattttcttttgaatggctacgattatggttgtta...

Basic information

species Glycine max
transcript GLYMA10G24350.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27425309|gb|CA936829.1|CA936829
EST:     AGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: AGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|7926083|gb|AW832109.1|AW832109
EST:     TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|192320515|gb|FK011925.1|FK011925
EST:     GTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: GTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|13479182|gb|BG508525.1|BG508525
EST:     CAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: CAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|213618238|gb|DB973008.1|DB973008
EST:     AAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: AAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|13791609|gb|BG654200.1|BG654200
EST:     TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|192308052|gb|FG999035.1|FG999035
EST:     AAAGACGCACGCAACGTTCAGAAACCAAATCT                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: AAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|213595893|gb|DB966252.1|DB966252
EST:     CGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: CGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|10232355|gb|BE801243.1|BE801243
EST:     TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: TCTCTTTCTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
EST: gi|27446299|gb|CA953422.1|CA953422
EST:     CTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCG                         GTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT
genomic: CTGTTCTTCTCAAAGACGCACGCAACGTTCAGAAACCAAATCGgtaagattct ... ttaacaacagGTTTGAGTCCTCATTACCCGCCTCTCTCTGGAAACCAGCAAAACCACCTT