Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|4289761|gb|AI437972.1|AI437972EST: CCTGGCTGTTTTCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAG CATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
genomic: CCTGGCTGTTTTCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAGgtattttcct ... tccataacagCATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
EST:
gi|120528854|gb|EH256988.1|EH256988EST: CCTGGCTGTTTTCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAG CATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
genomic: CCTGGCTGTTTTCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAGgtattttcct ... tccataacagCATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
EST:
gi|18040644|gb|BM308947.1|BM308947EST: TCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAG CATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
genomic: TCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAGgtattttcct ... tccataacagCATCACCATACTTTTCTTTGCAAAAGAAGGGGAAGGTTGCACCCTAACCCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATGTCAACATCAAGAAGGAGACGCTTAGGATTGAGCCTGATGACGAGAATCCTGGCTGTTTTCTCGTGTCGTTTACGTTTGATGCCACCGTTTCGGGAAGgtattttccttttttgtaatgatggtgtaacaaggtaattatgttttccttaggtgtactcgcggtcttggacgaaaattaattagttactgctttcggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT