1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GTTCCCTTTTGTTTTCAGAGACATACATAGGCCCCAGAAGAACAAATTGCTACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAGgtactctcattcatttttattggactttggaaccgcccccccccccccccccccctttttcaatttttaagaaaaattgctatttttgcactttcccatt...
species | Glycine max |
transcript | GLYMA10G05720.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAG GGCTCAAAGTGAGGAATGCGAAGAAAATGGGGAGGAAAGGAAATAGTTGGTEST: gi|213590595|gb|DB968131.1|DB968131
genomic: TACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAGgtactctcat ... ccgtataaagGGCTCAAAGTGAGGAATGCGAAGAAAATGGGGAGGAAAGGAAATAGTTGGT
EST: TACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAG GGCTCAAAGTGAGGAATGCGAAGAAAATGGGGAGGAAAGGAAATAGTTGGT
genomic: TACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAGgtactctcat ... ccgtataaagGGCTCAAAGTGAGGAATGCGAAGAAAATGGGGAGGAAAGGAAATAGTTGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCCCTTTTGTTTTCAGAGACATACATAGGCCCCAGAAGAACAAATTGCTACAACCTATTTTGATTTGAGATCTGTCTGTCTCTTTGGTTTCACTTCAGgtactctcattcatttttattggactttggaaccgcccccccccccccccccccctttttcaatttttaagaaaaattgctatttttgcactttcccatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cgccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccccccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttccc