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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTCATTTCACTCACTCACTCTTCGTTTCGTTTCTCTTTCTCACTCTAGATCTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCGgtgagttcccgtttttgctccttccactcccaccgctagggtttttccctctgttttaacgcatcgtcaccgttgcgatgctcctaaactgttttttatt...

Basic information

species Glycine max
transcript GLYMA10G05130.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151397331|gb|EV267204.1|EV267204
EST:     CAACCTTCGTTTCACCACACTTCCATCACTTGTCG                         AGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
genomic: CAACCTTCGTTTCACCACACTTCCATCACTTGTCGgtgagttccc ... attatttcagAGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
EST: gi|192331411|gb|FK022716.1|FK022716
EST:     CTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCG                         AGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
genomic: CTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCGgtgagttccc ... attatttcagAGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
EST: gi|192334513|gb|FK024472.1|FK024472
EST:     CTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCG                         AGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
genomic: CTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCGgtgagttccc ... attatttcagAGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
EST: gi|193704216|gb|FK647480.1|FK647480
EST:     CTGNGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCG                         AGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT
genomic: CTGTGTTTCTCTCTCCAACCTTCGTTTCACCACACTTCCATCACTTGTCGgtgagttccc ... attatttcagAGTGTAGAAATGGCTCCACCAATTGAGACCCCAACCAAGGTTTCCAGCTAT