1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGTTTCCTCCTCCGTCGGGCCTGAGTATTACGTCGGAATCTTGTCTTTCGTCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctcactcgctttacgcttttattggtggtggttattgaaatgaaatacgtcaaattatgaaattattggaaatacctcattgcctagggtttga...
species | Glycine max |
transcript | GLYMA10G04920.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|208123894|gb|GD922458.1|GD922458
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|17400370|gb|BM177152.1|BM177152
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|209722804|gb|BW669398.1|BW669398
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|193640683|gb|FK591416.1|FK591416
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|254313973|gb|GR831602.1|GR831602
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|209713106|gb|BW653813.1|BW653813
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCTEST: gi|26058956|gb|CA801870.1|CA801870
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
EST: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAG GTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
genomic: TCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctca ... tttttatcagGTTCTTTCTGTTGTTGGGCTTCTTCAAGATGAAGTTGATCCAATGGTCTCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTTCCTCCTCCGTCGGGCCTGAGTATTACGTCGGAATCTTGTCTTTCGTCGATAAGGATCAGTTGGAGCCTGGTTGTGCTATTTTGATGCATAATAAGgttttgctcactcgctttacgcttttattggtggtggttattgaaatgaaatacgtcaaattatgaaattattggaaatacctcattgcctagggtttga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gtggtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatgaaa