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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACTCGTATCGTATATAAACCTCTGCTTCACTCTTCTCCTTCTACTTCTCTTTTTTACACTAAGTTTTTATTTCAACAGAGgttcgcgtaccttctcgaatcttcctcttcctttcatattcagatctgaattttgttcatttatttttcttacaatttcctttgattaatcgtggtttttatttttgtattttttttttggctag

Basic information

species Glycine max
transcript GLYMA10G04020.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192323181|gb|FK018952.1|FK018952
EST:     ACACTAAGTTTTTATTTCAACAGAG                         GAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA
genomic: ACACTAAGTTTTTATTTCAACAGAGgttcgcgtac ... ttttggctagGAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA
EST: gi|193701629|gb|FK639523.1|FK639523
EST:     CTACTTCTC-TTTTTACTACTAAGTTTTTATTTCAACAGAG                         GAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA
genomic: CTACTTCTCTTTTTTAC-ACTAAGTTTTTATTTCAACAGAGgttcgcgtac ... ttttggctagGAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA
EST: gi|192298747|gb|FG988613.1|FG988613
EST:     ACACTAAGTTTTTATTTCAACAGAG                         GAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA
genomic: ACACTAAGTTTTTATTTCAACAGAGgttcgcgtac ... ttttggctagGAAACGCGATTGAGAATTTGCGAAACGGTGTTGGAATTTGTGATCTGGTGA