1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
TTGCCACTTTATAAGTCATCATCACCCTCCACTGGTTTTCATTAACAAACCTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaataagattcatcttcatccattttgtaaaaatgtgttgtttttttttttaccagctttgatcatgtgaatgtttgtggggttggaatgaag...
species | Glycine max |
transcript | GLYMA09G35050.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTEST: gi|18733683|gb|BM527753.1|BM527753
genomic: CTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
EST: GGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTEST: gi|21888360|gb|BQ741573.1|BQ741573
genomic: GGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
EST: GGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTEST: gi|9986444|gb|BE660552.1|BE660552
genomic: GGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
EST: CACCACTTGGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTEST: gi|213614158|gb|DB964902.1|DB964902
genomic: CACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
EST: CTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTEST: gi|15664114|gb|BI701485.1|BI701485
genomic: CTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
EST: CAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAG AATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
genomic: CAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaa ... acttgtgcagAATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGCCACTTTATAAGTCATCATCACCCTCCACTGGTTTTCATTAACAAACCTTCTTCAAAGTCCCACCACTTGGTTTTCATAACCCATTCTCCATCTCAGgtacacctaataagattcatcttcatccattttgtaaaaatgtgttgtttttttttttaccagctttgatcatgtgaatgtttgtggggttggaatgaag
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