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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGACCATTTTGGCCCTGGCGTTGTGGCTCGGAACCATTCATTTCAACGTCGCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTTgttcgtttctctttcctttggtttcttcccttcaattatacacacgtgtatatttacacgtgtctctctctcactgtgtgattaaaatgagaaggttgttatgtcag

Basic information

species Glycine max
transcript GLYMA09G32790.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15204842|gb|BI427610.1|BI427610
EST:     GCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTT                         GCTTTTCGGTTTGCTTTTCGTGCTCATGGTAATTCCTGTTGATGAAAAGAG
genomic: GCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTTgttcgtttct ... gttatgtcagGCTTTTCGGTTTGCTTTTCGTGCTCATGGTAATTCCTGTTGATGAAAAGAG
EST: gi|20075813|gb|BQ094596.1|BQ094596
EST:     GCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTT                         GCTTTTCGGTTTGCTTTTCGTGCTCATGGTAATTCCTGTTGATGAAAAGAG
genomic: GCGTTGGTGCTCTTCGCAATCTTCTTCCTCTCTCTCCACAAAGCACTTTTgttcgtttct ... gttatgtcagGCTTTTCGGTTTGCTTTTCGTGCTCATGGTAATTCCTGTTGATGAAAAGAG