1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CATCACCGTTTTTATTTCCATTCACAAAACCAACAACCTCTCTGTGATTTTTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaattgcgtattcacttcagccatcactttttcagctcagatttcttttttatctctctatttgtttttttgcttgatctcgattcagtttttgt...
species | Glycine max |
transcript | GLYMA09G32510.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTG GTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCACACTEST: gi|254320473|gb|GR826922.1|GR826922
genomic: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaatt ... aaaaaaacagGTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCGCACT
EST: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTG GTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTEST: gi|213598535|gb|DB964213.1|DB964213
genomic: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaatt ... aaaaaaacagGTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGT
EST: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTG GTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCGCACTEST: gi|209722262|gb|BW662407.1|BW662407
genomic: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaatt ... aaaaaaacagGTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCGCACT
EST: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTG GTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCGCACT
genomic: TTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaatt ... aaaaaaacagGTCAAATATTGGCTAATGTGGGTGGGACATTCATCTATGTACAAGCGCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATCACCGTTTTTATTTCCATTCACAAAACCAACAACCTCTCTGTGATTTTTCTTCACTTTTCTCTCTCGGAACAAAACGGAGGATCCGTCATAGTATTGgtgcgtaattgcgtattcacttcagccatcactttttcagctcagatttcttttttatctctctatttgtttttttgcttgatctcgattcagtttttgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT