1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
AAAACTCTAAACTGTGAAAAAACCACTGCGATCAATGGCAACGATCAAGGCCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttgctctttcaccatttcctcttgtcgttttctgtttggatactgagaaaatgtgcgagacaaaaaataagttcacgttctattttcggtgtt...
species | Glycine max |
transcript | GLYMA09G28100.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|209710951|gb|BW656980.1|BW656980
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|7796588|gb|AW781985.1|AW781985
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: GTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|209712453|gb|BW671305.1|BW671305
genomic: GTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|37994573|gb|CF806274.1|CF806274
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|192322987|gb|FK016718.1|FK016718
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|17022623|gb|BM093657.1|BM093657
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|15814140|gb|BI786415.1|BI786415
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|209704369|gb|BW678365.1|BW678365
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|298175490|gb|HO018201.1|HO018201
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|16996515|gb|BM085887.1|BM085887
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|19052750|gb|BM731417.1|BM731417
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|18730045|gb|BM525649.1|BM525649
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|24135517|gb|BU926027.1|BU926027
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|37995932|gb|CF807521.1|CF807521
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|254320851|gb|GR827300.1|GR827300
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|254319290|gb|GR828910.1|GR828910
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGCEST: gi|209701948|gb|BW683177.1|BW683177
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
EST: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAA GTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
genomic: CCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttg ... tttatgtcagGTTGACGTTATTCTCAGCGATGGAAGCTTCCACAGAGCCGCCGTGCCTAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAACTCTAAACTGTGAAAAAACCACTGCGATCAATGGCAACGATCAAGGCCGTGAAAGCTCGCCAGATCTTCGACAGCCGTGGAAATCCAACCGTCGAAgtgagtcttgctctttcaccatttcctcttgtcgttttctgtttggatactgagaaaatgtgcgagacaaaaaataagttcacgttctattttcggtgtt
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