1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGGCTCTCGTCGCCGTGTTTGTTGCCATGGCCATGTCTTCCAGAACCTCTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttctcaataacccacattttaagtttccttattcattttttttgttgaattgtggaattctgaatcttgatgtgttattcagttttatagtgt...
species | Glycine max |
transcript | GLYMA09G10830.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAGEST: gi|254313612|gb|GR831241.1|GR831241
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAGEST: gi|209704078|gb|BW673678.1|BW673678
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAGEST: gi|209720049|gb|BW659448.1|BW659448
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAGEST: gi|17519016|gb|BM188058.1|BM188058
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCTTTTTTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAEST: gi|213596204|gb|DB960164.1|DB960164
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACC-GAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGA
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAGEST: gi|254329295|gb|GR833667.1|GR833667
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
EST: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGG GGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
genomic: CTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttc ... tctgttgcagGGCACACCGAAGTACAGTGGCATGGTGGAAGATTGTTGTTGTGATTATGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGGCTCTCGTCGCCGTGTTTGTTGCCATGGCCATGTCTTCCAGAACCTCTCCAAAAGCTCTGTTTGGAGCCATTGATAGAGCTTGTCCGTGTGCTCGGgtaatttttctcaataacccacattttaagtttccttattcattttttttgttgaattgtggaattctgaatcttgatgtgttattcagttttatagtgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT