1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CAGAATTCACCACTCACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagtttttctctgtttttttttttttgttgttgttgttctgatgaaaatctcgtgaacttgtgtgcatttgctttcactcattgttgattaaacgcgtatgattattctaatttttaaaccattgttatgtgaag
species | Glycine max |
transcript | GLYMA09G06860.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAEST: gi|208235102|gb|GE029596.1|GE029596
genomic: ACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
EST: ACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAEST: gi|298175439|gb|HO015072.1|HO015072
genomic: ACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
EST: GACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAEST: gi|192302636|gb|FG994888.1|FG994888
genomic: GACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
EST: GCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAEST: gi|209706672|gb|BW676168.1|BW676168
genomic: GCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
EST: ACGAGCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAAEST: gi|192307307|gb|FK001265.1|FK001265
genomic: ACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
EST: ACCACTCACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGA AATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
genomic: ACCACTCACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagttttt ... ttatgtgaagAATGGGCGAAGCGAAGGCGTTGGTTCCGGAATCGGTGGTGAAGAAGGAGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGAATTCACCACTCACGACCCTCCGCCGCCGCGGTTGCAAGCAGAGCACACCATCGAgtgagtttttctctgtttttttttttttgttgttgttgttctgatgaaaatctcgtgaacttgtgtgcatttgctttcactcattgttgattaaacgcgtatgattattctaatttttaaaccattgttatgtgaag
- - - - - - - - - - - - - - - - - - - - - AGAGCA