Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|208290187|gb|GE082279.1|GE082279EST: ATCGCCACACTTCCACCAAAGGG ATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAG
genomic: ATCGCCACACTTCCACCAAAGGGgtagtctctc ... attggtgtagATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAG
EST:
gi|6964053|gb|AW432746.1|AW432746EST: AAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGG ATGGATCCCAAGTTTCTGAGGAATCAGAGGTACCCGAGGAAGCACAACAAG
genomic: AAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGgtagtctctc ... attggtgtagATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAG
EST:
gi|5677275|gb|AI938405.1|AI938405EST: AAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGG ATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAG
genomic: AAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGgtagtctctc ... attggtgtagATGGATCCCAAGTTTCTGAGGAATCAGAGGTACGCGAGGAAGCACAACAAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GGCAAAGTCGAAGAATCACACAGCACACAATCAGTCCTACAAGGCCCACAAAAACGGCATCAAGAAACCCAAGAGGCATCGCCACACTTCCACCAAAGGGgtagtctctctctctctctctctctctctctctctctctctctcttttatgtttttgggttctcttttactctgatacatatgtttatttattttcgggtaatttaattatgctttttttaacaaaataaataaatttatgcgtttgtgttgttggcaattggtgtag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGG