1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAGGTGCCGCACTGCTCCCACCGAAGGCGTTTCCTTCACTCTCCAACAATTCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgttacccttcccttcctttcactctccaactattcaattcaacctttgtctactatgcattattagagtgttttgtgtttccctagtttttact...
species | Glycine max |
transcript | GLYMA09G03660.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATTEST: gi|19268662|gb|BM884918.1|BM884918
genomic: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgtta ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATT
EST: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATTEST: gi|7692845|gb|AW760944.1|AW760944
genomic: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgtta ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATT
EST: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATTEST: gi|15337786|gb|BI498442.1|BI498442
genomic: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgtta ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATT
EST: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAG GTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATT
genomic: TCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgtta ... gtgttttcagGTTAAGGGCACTGTTTTTGCCACGGATAACAATGGAGCTTATGTTGACATT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGTGCCGCACTGCTCCCACCGAAGGCGTTTCCTTCACTCTCCAACAATTCACCGACGCTCTCGACAAGTACGACTTCAACGCCGAAATGGGCACCAAGgcacgtgttacccttcccttcctttcactctccaactattcaattcaacctttgtctactatgcattattagagtgttttgtgtttccctagtttttact
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccttccc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cactctcc