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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGAAACCATCACCATTCACCAGTCACCACCTTCTTCCTCGCATCGTTCGTCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATCgtaagcttcactttctcttcattctgatctcaaatctatctatgctcattaatttatatcatccttttctttttcttcattattgtttatttgctcataa...

Basic information

species Glycine max
transcript GLYMA09G02830.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|120495554|gb|EH223721.1|EH223721
EST:     TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATC                         GTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
genomic: TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATCgtaagcttca ... tcctttccagGTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
EST: gi|7692451|gb|AW760557.1|AW760557
EST:     TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATC                         GTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
genomic: TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATCgtaagcttca ... tcctttccagGTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
EST: gi|151394014|gb|EV263885.1|EV263885
EST:     TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATC                         GTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
genomic: TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATCgtaagcttca ... tcctttccagGTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
EST: gi|120495547|gb|EH223714.1|EH223714
EST:     TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATC                         GTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT
genomic: TCTTCTGTCTGTGGATTTCAAACTCTGCCATTTCGATTCCTTCGTTCATCgtaagcttca ... tcctttccagGTTATTTTGCTTGACTATTGTAGAGGCTGCAGCCTGGATGATTGGTGGGCT