1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CGGCGTCGCCATCGGCGACTTCGTCCTCGACCTCTCCGAAATATCTTCCGCTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcctcaacttgacaacttcaatctgcgtttcacttgttctaccaactaaggctacgtttggatacaactacaagttggaaaaagtacatatgcc...
species | Glycine max |
transcript | GLYMA09G01270.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|18692857|gb|BM521705.1|BM521705
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|213616587|gb|DB967545.1|DB967545
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|254346898|gb|GR856620.1|GR856620
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|213594530|gb|DB957977.1|DB957977
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|151410471|gb|EV280286.1|EV280286
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCGG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|19453154|gb|BM954564.1|BM954564
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|7924174|gb|AW830200.1|AW830200
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|16996748|gb|BM086120.1|BM086120
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|213599984|gb|DB966472.1|DB966472
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCGG CCTAATCTAAATAAGTTTGTATCACTTGAAAGACCAGCCTGGAAGGAAGCTEST: gi|15664491|gb|BI701862.1|BI701862
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCTEST: gi|192327116|gb|FK015508.1|FK015508
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
EST: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAG CCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
genomic: CTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcct ... acttttacagCCTAATCTAAATAAGTTTGTATCACTTGGAAGACCAGCCTGGAAGGAAGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGCGTCGCCATCGGCGACTTCGTCCTCGACCTCTCCGAAATATCTTCCGCTGGTCTCTTCGACGGTCCTCTCCTCAAAAACTCCGATGCTTTTCTCCAGgtaacttcctcaacttgacaacttcaatctgcgtttcacttgttctaccaactaaggctacgtttggatacaactacaagttggaaaaagtacatatgcc
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