Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192295531|gb|FG988105.1|FG988105EST: CACCGATCAGGTTCTTATGGCCAAGCACCTCCTCGAAGCAACGCTCATGG GTGCTATCCTTTTCCTTGCGCTTATGATAGACAGACTACATCATTACATAA
genomic: CACCGATCAGGTTCTTATGGCCAAGCACCTCCTCGAAGCAACGCTCATGGgtatgtattt ... ttatttgcagGTGCTATCCTTTTCCTTGCGCTTATGATAGACAGACTACATCATTACATAA
EST:
gi|193621257|gb|FK572257.1|FK572257EST: GAAGCAACGCTCATGG GTGCTATCCTTTTCCTTGCGCTTATGATAGACAGACTACATCATTACATAA
genomic: GAAGCAACGCTCATGGgtatgtattt ... ttatttgcagGTGCTATCCTTTTCCTTGCGCTTATGATAGACAGACTACATCATTACATAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ATGGTCAACATTCAGAAGCGTGGGATCGAGGAGGGTGCTATTGTTAACCCCACCGATCAGGTTCTTATGGCCAAGCACCTCCTCGAAGCAACGCTCATGGgtatgtatttcttttttcattccatgatttgctttgttttctgaattcctgatctgattcatgtgtgtgtgcaaggtaatcaaatccttcttatattagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA