1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ATCTGTTTCATTTGATTTTGATTCGAACTCAGACAGAGACATAGCCTCTTTCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTgttaggtttgcgaatttgcttttgtttttgtaatactttgcaacccctcccaccccctttcgatttcgcaggtgggcgaattttttaatgtttcggtgtttcaaattcgcag
species | Glycine max |
transcript | GLYMA09G00630.2 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTTEST: gi|213594272|gb|DB973597.1|DB973597
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTTEST: gi|213594272|gb|DB973597.1|DB973597
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTTEST: gi|151407141|gb|EV276956.1|EV276956
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCT ATACGAATTACTCTTCCAATTTCATCATGGCCAAAACCTCCTTCAAGCTTCEST: gi|33389770|gb|CA852977.1|CA852977
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTgttaggtttg ... aaattcgcagATACGAATTACTCTTCCAATTTCATCATGGCCAAAACCTCCTTCAAGCTTC
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTTEST: gi|33389770|gb|CA852977.1|CA852977
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTTEST: gi|33389770|gb|CA852977.1|CA852977
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
EST: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTGTT
genomic: TCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCC---Tgttaggtttg ... aaattcgc
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCTGTTTCATTTGATTTTGATTCGAACTCAGACAGAGACATAGCCTCTTTCTTTCGTTTGGAGAAACAAACCCCTCGTTTCAATCATTGATCCTTTCCTgttaggtttgcgaatttgcttttgtttttgtaatactttgcaacccctcccaccccctttcgatttcgcaggtgggcgaattttttaatgtttcggtgtttcaaattcgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA