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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGTAAGCAGGCGGCATGGCATTCTCAGCGGTCTGGCGACTAGCGAATCTTGGGCGACACTTGGATTTGAGTGAATCAGTGAACAAGgtattgtcgcataatcatcgttagtatttgctgctataccaagttatattattcatatgcaaagtgtaaaatgggttttgatatag

Basic information

species Glycine max
transcript GLYMA09G00500.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18734973|gb|BM528493.1|BM528493
EST:     CGACACTTGGATTTGAGTGAATCAGTGAACAAG                         GCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA
genomic: CGACACTTGGATTTGAGTGAATCAGTGAACAAGgtattgtcgc ... tttgatatagGCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA
EST: gi|298172196|gb|HO021788.1|HO021788
EST:     GACTAGCGAATCTTGGGCGACACTTGGATTTGAGTGAATCAGTGAACAAG                         GCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA
genomic: GACTAGCGAATCTTGGGCGACACTTGGATTTGAGTGAATCAGTGAACAAGgtattgtcgc ... tttgatatagGCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA
EST: gi|298176891|gb|HO026898.1|HO026898
EST:     GACTAGCGAATCTTGAGCGACACTTGGATTTGGGTGAATCAGTGAACAAG                         GCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA
genomic: GACTAGCGAATCTTGGGCGACACTTGGATTTGAGTGAATCAGTGAACAAGgtattgtcgc ... tttgatatagGCTGCGCCAGTTGGGTCAATCAAGTTGAAGGTAGCTTCAGAGGTTTCTGAA