1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgaccagcttatagcatgccaaaatacagatcacaccaaaccattaggcacatacataattattattcacaccttttgttttgttttctttccct...
species | Glycine max |
transcript | GLYMA08G42300.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATG CTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAGEST: gi|298187885|gb|HO031842.1|HO031842
genomic: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgacc ... ttacttatagCTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAG
EST: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATG CTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAGEST: gi|193358459|gb|FK324119.1|FK324119
genomic: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgacc ... ttacttatagCTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAG
EST: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATG CTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAGEST: gi|208257640|gb|GE053737.1|GE053737
genomic: ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgacc ... ttacttatagCTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAG
EST: CTAAATCTTTGTGTCTATCGTATTTTATCTCTTTCCATATG CTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAG
genomic: CTAAATC-TTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgacc ... ttacttatagCTTCCAACCATGGAGGATCCAAATCAAGCTCCAGAAGCGTCTTCTCAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCCTAAATCTTGTGTCTATTGTATTTTATCTCTTTCCATATGgttagtgaccagcttatagcatgccaaaatacagatcacaccaaaccattaggcacatacataattattattcacaccttttgttttgttttctttccct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctttccc